S$995 Cheap Flights from Manila to San Juan

View S$995 flight on Wed, 3 Sep, 2025Opens in a new window

Popular airlines from Ninoy Aquino Intl. Airport (MNL) to Luis Munoz Marin Intl. Airport (SJU)

  • Plan, book, fly with confidence

  • trending down icon

    Be in the know

    Get alerts if flight prices drop or rise*
  • bex rewards loyalty icon

    Book smarter

    Save up to 40% on select hotels after you book a flight*
  • payments icon

    Earn twice

    Earn your airline miles on top of our rewards
    Sign in

Cheap Flights from Manila to San Juan (MNL-SJU)

Prices were available within the past 7 days and start at S$995 for one-way flights and for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Find the cheapest month to fly from Manila (MNL) to San Juan (SJU)

October is typically the cheapest month to fly

From S$1,372 - S$2,194 per traveller.

Graph displaying average flight prices per month

Manila to San Juan route information
Origin airport
Ninoy Aquino Intl.
Destination airport
Luis Munoz Marin Intl.
Distance
16176 km

Flights from Manila to San Juan

There are several airlines that operate frequent flights from Manila (MNL) to San Juan (SJU) including

The earliest flight leaves Ninoy Aquino Intl. Airport at 21:00 and arrives at Luis Munoz Marin Intl. Airport at 13:46. The last flight of the day departs Manila at 22:00 and arrives at San Juan at 15:30.

The flight distance from Manila to San Juan is about 17214 km, the shortest flight is 00 hours with Philippine Airlines.

Expedia lets you search across the largest number of airlines and San Juan flights, which means that you’ll be able to find a great flight deal at the perfect travel date and time. Our simple-to-use booking engine makes looking for terrific bargains easy and hassle-free; just enter your travel dates and departure city, and let Expedia do the rest! Adjust your travel dates and explore connecting flights to find an even better deal on your Manila San Juan flight!

Browse through dozens of options and rest assured that you’re seeing the best price guaranteed! Our friendly customer service representatives are here to serve you 24 hours day to provide assistance and answer any questions that you may have about booking your Manila to San Juan trip. There’s simply no substitute for great prices suited to your travel needs and backed by excellent customer support.

Combine your San Juan flight with a hotel and/or car rental for a package deal designed to save you even more money! Discover additional savings by booking in advance or find a last minute deal. There are tons of ways to save on your flights from Manila to San Juan with Expedia. Use us as your stop travel destination and have the confidence that you’re getting a bargain!

Frequently asked questions

How much is a flight from Manila Intl. Airport to SJU?
If you're planning on travelling from Manila Intl. Airport to SJU, round-trip flights start from . This figure is based on fares listed within the last 7 days on Expedia for flights departing within the next year, so don't wait around. Book today and save yourself both money and time. Prices and availability are subject to change. Additional terms apply.
Do I need to pay a cancellation fee if I cancel my flight from Ninoy Aquino Intl. Airport (MNL) to SJU?
Each air carrier has a different set of terms and conditions. If you decide to cancel your getaway, head to our Customer Service Portal.
How do I find cheap flights from Ninoy Aquino Intl. Airport (MNL) to Luis Munoz Marin Intl. Airport (SJU) that have flexible change policies?
Many airlines offer the option to reschedule your flight without a change fee. All you pay is the difference between the original flight and the new flight. When you're searching for Ninoy Aquino Airport to SJU flights, you'll see a "no change fees" filter for you to select.
How far is the flight from Manila Intl. Airport to SJU?
The distance is around 16,300 kilometres, so pack your carry-on luggage with all you need to make the long journey comfortable. Wondering what to take on board your Parañaque to Carolina flight? Earplugs, a sleep mask and a travel pillow are among the essentials.
Which airlines fly direct from Ninoy Aquino Intl. Airport (MNL) to Luis Munoz Marin Intl. Airport (SJU)?
If you want to travel straight from MNL to Luis Munoz Marin Intl. Airport (SJU), you'll need to book a flight with at least one stop. Unfortunately, there are no airlines that fly directly on this route.
Are Ninoy Aquino Intl. Airport (MNL) to Isla Verde Intl. Airport flight tickets cheaper when they're purchased at the last minute?
Booking your trip from Ninoy Aquino Intl. Airport (MNL) to SJU last minute could be your ticket to a cheap deal. However, it could end up costing a good deal more! If you'd rather not take any chances, book well ahead of your departure date. In fact, Expedia has some of the biggest bargains as far ahead as 12 months in advance. If your preferred air carrier hasn't released tickets yet, check back regularly as deals are updated on Expedia all the time.
*Available to Expedia members.