Hotels in Indian Waters

  • Plan, book, stay with confidence
    • bex rewards loyalty icon
    Be picky
    Search almost a million properties worldwide
    payments icon
    Treat yourself
    Sign in to save 10% or more on thousands of hotels
    Sign in
    today icon
    Change your mind
    Book hotels with free cancellation

Filter by

Guest rating
Guest rating
Property class

Top 10 Hotels in Indian Waters

Paddletail Waterfront Lodge
Outdoor pool, pool umbrellas, pool loungers
Paddletail Waterfront Lodge
2.5 star property
8.6 out of 10, Excellent, (1011)
"The motel was so cute! Very nice. Will definitely stay there again in the future! "
The price is S$160
includes taxes & fees
1 Dec - 2 Dec
Paddletail Waterfront Lodge
Retreat at Crystal Manatee
Garden
Retreat at Crystal Manatee
2.5 star property
9.4 out of 10, Exceptional, (287)
"Crystal Manatee is super charming and we loved the gardens. The staff is amazing."
The price is S$244
includes taxes & fees
8 Dec - 9 Dec
Retreat at Crystal Manatee
Withlacoochee Motel
Seasonal outdoor pool
Withlacoochee Motel
2.0 star property
7.8 out of 10, Good, (319)
"helpful staff person"
The price is S$134
includes taxes & fees
1 Dec - 2 Dec
Withlacoochee Motel
Nature Coast Inn and Cottages
Terrace/patio
Nature Coast Inn and Cottages
3.0 star property
9.2 out of 10, Wonderful, (55)
"The Nature Coast Inn The nature coast in was a beautiful, safe, clean and comfortable place! Connie was so welcoming and sweet! I loved it!"
The price is S$273
includes taxes & fees
24 Nov - 25 Nov
Nature Coast Inn and Cottages
Days Inn by Wyndham Crystal River
Hypo-allergenic bedding, desk, iron/ironing board, free cots/infant beds
Days Inn by Wyndham Crystal River
2.0 star property
7.2 out of 10, Good, (1004)
"Property was lovely clean and comfortable. Liked the fact there was a bar and a Denny’s right next door, would have happily stayed longer but got off because of the hurricane. "
Days Inn by Wyndham Crystal River
King's Bay Lodge
Property amenity
King's Bay Lodge
2.5 star property
9.4 out of 10, Exceptional, (257)
"Fantastic! Best place to stay in crystal river. "
King's Bay Lodge
Quality Inn Crystal River
Outdoor pool
Quality Inn Crystal River
2.5 star property
7.2 out of 10, Good, (823)
"Very impressed with this hotel. Bed was comfortable, very clean room, nice a cool temp, close to everything. The front desk receptionist was very informative and pleasant to chat with. We will say here again. Very nice hotel. Close to everything we had planned. Even had time to come back and shower before check out time"
Quality Inn Crystal River
Crystal River Lullaby B&B
Beach towels, kayaking
Crystal River Lullaby B&B
4.0 star property
10.0 out of 10, Exceptional, (32)
"We loved our stay at Lullaby! It is such a unique property and area. The hosts are so accommodating & friendly. Room was well done in a theme of Ireland & Celtic music. Spacious, comfortable with all the amenities you would need. The food was excellent! Accommodations were made for us to take a good breakfast basket with us when needed. Beautiful surroundings! Would have loved to kayak through the estuaries but time and weather didn’t allow this time. We will be back!"
The price is S$325
includes taxes & fees
4 Dec - 5 Dec
Crystal River Lullaby B&B
Stilt-style Cottage < 1 Mi to Downtown Yankeetown!
Private kitchen
Stilt-style Cottage < 1 Mi to Downtown Yankeetown!
3.0 star property
Stilt-style Cottage < 1 Mi to Downtown Yankeetown!
Crystal River Getaway w/ Hot Tub & Fire Pit!
Outdoor spa tub
Crystal River Getaway w/ Hot Tub & Fire Pit!
3.0 star property
10.0 out of 10, Exceptional, (2)
"House was very clean, updated and neighborhood quite. Lovely stay, would definitely stay again "
Crystal River Getaway w/ Hot Tub & Fire Pit!
Crystal River Vacation Rental on Canal!
Exterior
Crystal River Vacation Rental on Canal!
3.0 star property
10.0 out of 10, Exceptional, (2)
"Amazing place to stay with everything we needed. Defiantly will stay again"
Crystal River Vacation Rental on Canal!
Econo Lodge Crystal River
Free WiFi, bed sheets
Econo Lodge Crystal River
2.0 star property
6.8 out of 10, (628)
"Always good every time i come there. Great people"
Econo Lodge Crystal River
Riverfront Fishers Paradise in Florida w/ Dock!
Terrace/patio
Riverfront Fishers Paradise in Florida w/ Dock!
3.0 star property
8.0 out of 10, Very good, (1)
"Ruhig, idyllisch, schönes Haus. "
Riverfront Fishers Paradise in Florida w/ Dock!
Riverfront Inglis Duplex w/ Shared Dock & Fire Pit
Microwave, oven, stovetop, dishwasher
Riverfront Inglis Duplex w/ Shared Dock & Fire Pit
3.0 star property
10.0 out of 10, Exceptional, (1)
Riverfront Inglis Duplex w/ Shared Dock & Fire Pit
Crystal River Cottage on 1 Acre w/ Deck & Porch!
Living area
Crystal River Cottage on 1 Acre w/ Deck & Porch!
2.0 star property
10.0 out of 10, Exceptional, (5)
""Everything was great! The home was clean, well organized, and in a very private location but not far from anything. Upon arrival, we found home-baked treats left for us, and it was just what we needed after a long day of travel. The cozy and quiet atmosphere is exactly what we were looking for. We feel grateful that a house like this is available for rent at a very reasonable price. Thank you for a great stay."
Crystal River Cottage on 1 Acre w/ Deck & Porch!
Waterside Anglers Heaven: Crooked River Fish Camp
TV, books
Waterside Anglers Heaven: Crooked River Fish Camp
3.0 star property
Waterside Anglers Heaven: Crooked River Fish Camp
Bright Crystal River Home ~ 2 Mi to State Parks!
Private kitchen
Bright Crystal River Home ~ 2 Mi to State Parks!
3.0 star property
Bright Crystal River Home ~ 2 Mi to State Parks!
Crystal Isles RV Resort
Outdoor pool
Crystal Isles RV Resort
2.5 star property
6.8 out of 10, (15)
"No wifi, no soap or shampoo. Be sure to pack it."
Crystal Isles RV Resort
Homosassa River Home w/ Private Boat Ramp & Kayaks
Private kitchen
Homosassa River Home w/ Private Boat Ramp & Kayaks
3.0 star property
Homosassa River Home w/ Private Boat Ramp & Kayaks
Waterfront Homosassa Home w/ Private Dock & Deck!
Dining
Waterfront Homosassa Home w/ Private Dock & Deck!
3.0 star property
Waterfront Homosassa Home w/ Private Dock & Deck!
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.
Don't see what you're looking for?
See all available properties in Indian Waters
Save an average of 15% on thousands of hotels when you're signed in
Sign in
Sign up, it's free
Beautiful view of the beach with palm trees

Black Friday: Members save 30%+

Members save 30%+ on selected hotels until 4 Dec (property time) with our Black Friday deals. Stay by 15 Dec 2025.
Unlock Black Friday deals

Frequently asked questions

What is Indian Waters like?

Travellers will be sure to find plenty to entertain them in Crystal River's Indian Waters neighbourhood.

How many hotels will I find in the Indian Waters area?

If you're searching for places to stay in Crystal River, Expedia has something to meet your needs with 23 Indian Waters hotels and other accommodation options to choose from.

If I need to cancel my hotel reservation in Indian Waters, will I receive a refund?

Yes, you'll find most hotel room reservations are refundable provided that you cancel before the hotel’s cancellation deadline, which is usually within 24-48 hours of your arrival date. If your reservation is non-refundable, you might be able to still cancel and be given a refund within a 24-hour period of booking. Add your dates and click on "Search", then you can filter by "fully refundable" to view top deals in Indian Waters.

What is there to do around this Crystal River neighbourhood?

Yulee Sugar Mill Ruins, Crystal River Archaeological State Park and Crystal River Watersports Marina are just a few of the places to visit in and around Indian Waters. While you're out sightseeing, Fort Island Trail Park and Hunter Spring Park are a couple of additional sights to visit in Crystal River.